If more than 50 genes/sequences are provided as input, then the associated running time can take some time. Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes. After processing you will be send an email with a link to the created phylogenetic tree.
The selection modi are exclusive: please choose either Gene selection or Species selection.
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ) $local_species = 'acertr' $disabled = '' $selected = ''include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":"";
$selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":"";
$num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ) $local_species = 'acertr' $disabled = '' $selected = ''
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 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'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 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'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 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'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ) $local_species = 'ach' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ) $local_species = 'ach' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ) $local_species = 'aar' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 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'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 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'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 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'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ) $local_species = 'aar' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 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'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 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'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 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'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ) $local_species = 'amhyb' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ) $local_species = 'amhyb' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ) $local_species = 'atr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 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'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 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'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 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'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ) $local_species = 'atr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 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'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 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'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 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'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ) $local_species = 'aag' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ) $local_species = 'aag' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ) $local_species = 'aox' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 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'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 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'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 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'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ) $local_species = 'aox' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 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'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 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'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 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'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ) $local_species = 'aly' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ) $local_species = 'aly' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ) $local_species = 'ath' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 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'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 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'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 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'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ) $local_species = 'ath' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 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'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 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'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 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'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ) $local_species = 'arhy' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ) $local_species = 'arhy' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ) $local_species = 'ama' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 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'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 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'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 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'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ) $local_species = 'ama' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 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'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 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'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 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'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ) $local_species = 'bvu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ) $local_species = 'bvu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ) $local_species = 'bca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 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'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 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'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 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'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ) $local_species = 'bca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 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'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 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'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 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'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ) $local_species = 'bna' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ) $local_species = 'bna' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ) $local_species = 'bol' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 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'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 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'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 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'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ) $local_species = 'bol' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 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'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 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'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 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'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ) $local_species = 'bra' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ) $local_species = 'bra' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ) $local_species = 'camsi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 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'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 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'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 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'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ) $local_species = 'camsi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 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'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 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'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 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'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ) $local_species = 'cansat' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ) $local_species = 'cansat' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ) $local_species = 'cru' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 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'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 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'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 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'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ) $local_species = 'cru' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 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'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 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'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 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'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ) $local_species = 'can' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ) $local_species = 'can' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ) $local_species = 'chi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 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'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 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'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 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'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ) $local_species = 'chi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 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'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 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'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 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'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ) $local_species = 'cpa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ) $local_species = 'cpa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ) $local_species = 'cfa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 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'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 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'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 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'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ) $local_species = 'cfa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 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'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 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'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 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'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ) $local_species = 'cil' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ) $local_species = 'cil' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ) $local_species = 'cde' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 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'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 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'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 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'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ) $local_species = 'cde' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 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'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 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'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 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'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ) $local_species = 'cqu' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ) $local_species = 'cqu' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ) $local_species = 'car' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 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'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 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'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 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'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ) $local_species = 'car' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 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'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 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'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 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'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ) $local_species = 'cla' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ) $local_species = 'cla' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ) $local_species = 'ccl' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 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'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 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'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 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'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ) $local_species = 'ccl' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 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'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 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'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 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'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ) $local_species = 'ccan' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ) $local_species = 'ccan' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ) $local_species = 'col' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 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'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 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'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 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'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ) $local_species = 'col' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 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'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 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'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 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'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ) $local_species = 'cav' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ) $local_species = 'cav' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ) $local_species = 'cme' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 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'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 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'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 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'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ) $local_species = 'cme' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 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'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 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'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 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'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ) $local_species = 'csa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ) $local_species = 'csa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ) $local_species = 'dca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 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'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 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'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 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'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ) $local_species = 'dca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 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'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 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'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 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'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ) $local_species = 'din' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ) $local_species = 'din' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ) $local_species = 'dzi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 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'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 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'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 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'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ) $local_species = 'dzi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 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'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 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'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 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'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ) $local_species = 'eca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ) $local_species = 'eca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ) $local_species = 'egut' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 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'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 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'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 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'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ) $local_species = 'egut' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 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'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 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'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 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'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ) $local_species = 'egr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ) $local_species = 'egr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ) $local_species = 'esa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 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'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 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'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 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'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ) $local_species = 'esa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 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'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 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'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 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'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ) $local_species = 'fve' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ) $local_species = 'fve' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ) $local_species = 'fan' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 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'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 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'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 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'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ) $local_species = 'fan' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 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'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 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'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 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'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ) $local_species = 'gma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ) $local_species = 'gma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ) $local_species = 'ghi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 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'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 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'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 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'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ) $local_species = 'ghi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 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'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 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'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 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'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ) $local_species = 'gra' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ) $local_species = 'gra' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ) $local_species = 'han' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 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'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 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'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 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'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ) $local_species = 'han' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 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'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 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'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 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'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ) $local_species = 'hma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ) $local_species = 'hma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ) $local_species = 'lsa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 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'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 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'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 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'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ) $local_species = 'lsa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 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'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 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'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 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'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ) $local_species = 'lonja' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ) $local_species = 'lonja' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ) $local_species = 'lja' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 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'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 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'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 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'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ) $local_species = 'lja' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 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'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 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'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 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'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ) $local_species = 'lal' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ) $local_species = 'lal' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ) $local_species = 'mbi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 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'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 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'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 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'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ) $local_species = 'mbi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 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'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 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'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 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'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ) $local_species = 'mdo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ) $local_species = 'mdo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ) $local_species = 'mes' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 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'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 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'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 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'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ) $local_species = 'mes' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 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'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 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'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 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'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ) $local_species = 'mpo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ) $local_species = 'mpo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ) $local_species = 'mtr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 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'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 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'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 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'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ) $local_species = 'mtr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 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'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 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'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 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'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ) $local_species = 'nnu' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ) $local_species = 'nnu' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ) $local_species = 'nta' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 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'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 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'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 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'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ) $local_species = 'nta' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 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'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 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'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 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'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ) $local_species = 'oeu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ) $local_species = 'oeu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ) $local_species = 'osa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 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'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 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'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 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'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ) $local_species = 'osa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 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'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 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'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 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'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ) $local_species = 'pso' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ) $local_species = 'pso' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ) $local_species = 'pax' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 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'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 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'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 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'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ) $local_species = 'pax' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 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'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 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'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 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'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ) $local_species = 'pvu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ) $local_species = 'pvu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ) $local_species = 'ppa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 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'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 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'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 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'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ) $local_species = 'ppa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 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'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 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'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 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'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ) $local_species = 'psa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ) $local_species = 'psa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ) $local_species = 'ptr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 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'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 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'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 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'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ) $local_species = 'ptr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 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'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 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'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 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'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ) $local_species = 'ppe' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ) $local_species = 'ppe' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ) $local_species = 'pgr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 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'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 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'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 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'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ) $local_species = 'pgr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 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'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 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'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 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'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ) $local_species = 'qlo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ) $local_species = 'qlo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ) $local_species = 'rsi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 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'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 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'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 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'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ) $local_species = 'rsi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 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'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 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'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 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'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ) $local_species = 'rch' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ) $local_species = 'rch' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ) $local_species = 'sbr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 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'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 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'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 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'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ) $local_species = 'sbr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 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'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 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'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 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'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ) $local_species = 'sbo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ) $local_species = 'sbo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ) $local_species = 'shi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 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'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 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'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 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'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ) $local_species = 'shi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 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'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 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'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 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'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ) $local_species = 'spa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ) $local_species = 'spa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ) $local_species = 'sed' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 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'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 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'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 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'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ) $local_species = 'sed' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 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'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 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'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 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'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ) $local_species = 'smo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ) $local_species = 'smo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ) $local_species = 'sun' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 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'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 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'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 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'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ) $local_species = 'sun' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 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'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 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'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 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'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ) $local_species = 'sgi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ) $local_species = 'sgi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ) $local_species = 'sci' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 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'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 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'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 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'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ) $local_species = 'sci' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 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'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 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'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 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'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ) $local_species = 'sly' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ) $local_species = 'sly' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ) $local_species = 'spe' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 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'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 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'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 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'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ) $local_species = 'spe' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 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'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 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'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 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'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ) $local_species = 'stu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ) $local_species = 'stu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ) $local_species = 'sas' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 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'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 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'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 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'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ) $local_species = 'sas' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 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'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 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'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 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'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ) $local_species = 'tha' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ) $local_species = 'tha' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ) $local_species = 'tca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 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'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 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'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 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'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ) $local_species = 'tca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 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'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 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'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 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'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ) $local_species = 'tpr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ) $local_species = 'tpr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ) $local_species = 'twi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 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'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 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'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 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'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ) $local_species = 'twi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 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'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 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'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 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'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ) $local_species = 'tar' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ) $local_species = 'tar' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ) $local_species = 'ugi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 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'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 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'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 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'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ) $local_species = 'ugi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 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'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 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'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 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'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ) $local_species = 'vma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ) $local_species = 'vma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ) $local_species = 'vpl' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 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'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 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'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 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'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ) $local_species = 'vpl' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 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'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 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'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 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'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ) $local_species = 'vmu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ) $local_species = 'vmu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ) $local_species = 'vvi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 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'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 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'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 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'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ) $local_species = 'vvi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 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'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 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'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 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'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) $local_species = 'zma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ), 'gf_id' => 'HOM05D000495', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000495' ), 'data_identifier' => 'HOM05D000495', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000495', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1074', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p25930' => 'bna', 'A03p01900' => 'bna', 'A03p04380' => 'bna', 'A03p10360' => 'bna', 'A04p00570' => 'bna', 'A06p20480' => 'bna', 'A06p20560' => 'bna', 'A07p26070' => 'bna', 'A09p54580' => 'bna', 'A10p19080' => 'bna', 'A10p31270' => 'bna', 'Aa31LG10G16660' => 'aar', 'Aa31LG11G5830' => 'aar', 'Aa31LG1G13820' => 'aar', 'Aa31LG4G15960' => 'aar', 'Aa31LG4G15970' => 'aar', 'Aa31sc14G100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.659' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.747' => 'aag', 'Actinidia03948' => 'ach', 'Actinidia03949' => 'ach', 'Actinidia03951' => 'ach', 'Actinidia08560' => 'ach', 'Actinidia12885' => 'ach', 'Actinidia15454' => 'ach', 'Actinidia16070' => 'ach', 'Actinidia16371' => 'ach', 'Actinidia16372' => 'ach', 'Actinidia23897' => 'ach', 'Actinidia25145' => 'ach', 'Actinidia28623' => 'ach', 'Actinidia34448' => 'ach', 'Actinidia37790' => 'ach', 'Actinidia38757' => 'ach', 'Actinidia38830' => 'ach', 'Ah.06g187860' => 'amhyb', 'Ah.08g220690' => 'amhyb', 'Ah.08g222450' => 'amhyb', 'Ah.08g222460' => 'amhyb', 'Ah.09g223950' => 'amhyb', 'Ah.15g099130' => 'amhyb', 'Ah.15g099700' => 'amhyb', 'AL5G26220' => 'aly', 'AL5G26230' => 'aly', 'AL5G26280' => 'aly', 'AL5G26290' => 'aly', 'AL5G45460' => 'aly', 'AL6G14560' => 'aly', 'AL6G32510' => 'aly', 'AL6G32520' => 'aly', 'Aqoxy1G00559' => 'aox', 'Aqoxy1G00696' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3P4LGJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3P6LKP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41CPL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GQZ4H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7DAH0Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A99A55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H8P4Q7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4DEJL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M0FUS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NTRM8G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX7TTT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q18NCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R6C5BS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RLY867' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S78384' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WLQA50' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WM44RR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZ5PI0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL0K45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YNG10Q' => 'arhy', 'AT3G47000' => 'ath', 'AT3G47010' => 'ath', 'AT3G47040' => 'ath', 'AT3G47050' => 'ath', 'AT3G62710' => 'ath', 'AT5G04885' => 'ath', 'AT5G20940' => 'ath', 'AT5G20950' => 'ath', 'ATR0322G013' => 'atr', 'ATR0598G015' => 'atr', 'ATR0598G244' => 'atr', 'ATR0618G300' => 'atr', 'ATR0618G314' => 'atr', 'ATR0697G005' => 'atr', 'ATR0697G010' => 'atr', 'ATR0697G011' => 'atr', 'ATR0886G001' => 'atr', 'ATR0909G001' => 'atr', 'Atru.chr12.1158' => 'acertr', 'Atru.chr12.1159' => 'acertr', 'Atru.chr2.1403' => 'acertr', 'Atru.chr3.3031' => 'acertr', 'Atru.chr3.3035' => 'acertr', 'Atru.chr3.3036' => 'acertr', 'Atru.chr3.3037' => 'acertr', 'Atru.chr3.4070' => 'acertr', 'Atru.chr3.4071' => 'acertr', 'AUR62001589' => 'cqu', 'AUR62001687' => 'cqu', 'AUR62004017' => 'cqu', 'AUR62004018' => 'cqu', 'AUR62007526' => 'cqu', 'AUR62007527' => 'cqu', 'AUR62014289' => 'cqu', 'AUR62020095' => 'cqu', 'AUR62020191' => 'cqu', 'AUR62034146' => 'cqu', 'AUR62036281' => 'cqu', 'AUR62039730' => 'cqu', 'BcaB01g00954' => 'bca', 'BcaB01g00955' => 'bca', 'BcaB01g00956' => 'bca', 'BcaB01g00959' => 'bca', 'BcaB01g05920' => 'bca', 'BcaB02g07321' => 'bca', 'BcaB02g07323' => 'bca', 'BcaB02g07325' => 'bca', 'BcaB02g08103' => 'bca', 'BcaB05g22799' => 'bca', 'BcaB05g23530' => 'bca', 'BcaB05g23531' => 'bca', 'BcaB08g35042' => 'bca', 'BcaB08g37315' => 'bca', 'BcaC01g01860' => 'bca', 'BcaC01g01861' => 'bca', 'BcaC01g01864' => 'bca', 'BcaC01g04223' => 'bca', 'BcaC02g10307' => 'bca', 'BcaC03g13816' => 'bca', 'BcaC03g16084' => 'bca', 'BcaC04g19492' => 'bca', 'BcaC06g32194' => 'bca', 'BcaC08g45219' => 'bca', 'BcaC08g45222' => 'bca', 'BcaC08g45226' => 'bca', 'BcaC08g45236' => 'bca', 'BcaC09g49793' => 'bca', 'BcaNung05154' => 'bca', 'BcaNung05755' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01250' => 'bna', 'BolC1t03227H' => 'bol', 'BolC2t07085H' => 'bol', 'BolC2t09863H' => 'bol', 'BolC3t12778H' => 'bol', 'BolC3t13660H' => 'bol', 'BolC3t19404H' => 'bol', 'BolC3t19410H' => 'bol', 'BolC3t19411H' => 'bol', 'BolC3t19412H' => 'bol', 'BolC3t19413H' => 'bol', 'BolC4t23703H' => 'bol', 'BolC4t24583H' => 'bol', 'BolC6t38008H' => 'bol', 'BolC8t51328H' => 'bol', 'BolC9t58377H' => 'bol', 'BolC9t59938H' => 'bol', 'BraA01t02514Z' => 'bra', 'BraA02t05606Z' => 'bra', 'BraA03t09560Z' => 'bra', 'BraA03t10348Z' => 'bra', 'BraA03t14133Z' => 'bra', 'BraA04t15777Z' => 'bra', 'BraA06t25124Z' => 'bra', 'BraA06t25125Z' => 'bra', 'BraA06t25132Z' => 'bra', 'BraA07t30255Z' => 'bra', 'BraA08t35367Z' => 'bra', 'BraA09t37211Z' => 'bra', 'BraA09t40870Z' => 'bra', 'BraA10t43987Z' => 'bra', 'BraA10t45171Z' => 'bra', 'C01p32860' => 'bna', 'C02p10540' => 'bna', 'C02p38440' => 'bna', 'C03p02270' => 'bna', 'C03p11900' => 'bna', 'C03p71230' => 'bna', 'C03p71270' => 'bna', 'C03p71280' => 'bna', 'C04p21840' => 'bna', 'C04p30480' => 'bna', 'C06p28380' => 'bna', 'C08p37490' => 'bna', 'C09p55160' => 'bna', 'C09p71910' => 'bna', 'CAN.G1170.5' => 'can', 'CAN.G134.61' => 'can', 'CAN.G394.107' => 'can', 'CAN.G406.4' => 'can', 'CAN.G439.5' => 'can', 'CAN.G439.6' => 'can', 'CAN.G483.4' => 'can', 'CAN.G515.1' => 'can', 'CAN.G65.224' => 'can', 'CAN.G65.226' => 'can', 'CAN.G65.227' => 'can', 'CAN.G65.228' => 'can', 'CAN.G668.42' => 'can', 'CAN.G676.53' => 'can', 'CAN.G794.2' => 'can', 'CAN.G9.27' => 'can', 'CANSAT54G1516' => 'cansat', 'CANSAT54G2457' => 'cansat', 'CANSAT54G3022' => 'cansat', 'CANSAT56G3594' => 'cansat', 'CARHR155650' => 'chi', 'CARHR155670' => 'chi', 'CARHR172980' => 'chi', 'CARHR191890' => 'chi', 'CARHR191900' => 'chi', 'CARHR208390' => 'chi', 'Carub.0005s1322' => 'cru', 'Carub.0005s1323' => 'cru', 'Carub.0005s1328' => 'cru', 'Carub.0005s1329' => 'cru', 'Carub.0005s2938' => 'cru', 'Carub.0006s0380' => 'cru', 'Carub.0006s1926' => 'cru', 'Carub.0006s1927' => 'cru', 'Ca_00810_v3' => 'car', 'Ca_04477_v3' => 'car', 'Ca_05583_v3' => 'car', 'Ca_08285_v3' => 'car', 'Ca_14355_v3' => 'car', 'Ca_14356_v3' => 'car', 'Ca_14907_v3' => 'car', 'Ca_16264_v3' => 'car', 'Ca_16358_v3' => 'car', 'Cc00_g26320' => 'ccan', 'Cc01_g08360' => 'ccan', 'Cc01_g08370' => 'ccan', 'Cc01_g08380' => 'ccan', 'Cc01_g08390' => 'ccan', 'Cc01_g08400' => 'ccan', 'Cc01_g08410' => 'ccan', 'Cc01_g13890' => 'ccan', 'Cc01_g13900' => 'ccan', 'Cc02_g31040' => 'ccan', 'Cc06_g06120' => 'ccan', 'Cc06_g07180' => 'ccan', 'Cc06_g07190' => 'ccan', 'Cc06_g07200' => 'ccan', 'Cc06_g07210' => 'ccan', 'Cc06_g07220' => 'ccan', 'CDE06G2776' => 'cde', 'CDE10G0132' => 'cde', 'CDE10G0240' => 'cde', 'CDE10G0540' => 'cde', 'Cfa010463' => 'cfa', 'Cfa010464' => 'cfa', 'Cfa011649' => 'cfa', 'Cfa011650' => 'cfa', 'Cfa011651' => 'cfa', 'Cfa017670' => 'cfa', 'Cfa022226' => 'cfa', 'Cfa022227' => 'cfa', 'Ciclev10014537m.g' => 'ccl', 'Ciclev10017853m.g' => 'ccl', 'Ciclev10018271m.g' => 'ccl', 'Ciclev10019305m.g' => 'ccl', 'Ciclev10028018m.g' => 'ccl', 'Ciclev10028048m.g' => 'ccl', 'Ciclev10030270m.g' => 'ccl', 'CiPaw.10G126400' => 'cil', 'CiPaw.10G126500' => 'cil', 'CiPaw.13G046200' => 'cil', 'CiPaw.13G046300' => 'cil', 'CiPaw.13G081000' => 'cil', 'CiPaw.13G081100' => 'cil', 'CiPaw.13G124900' => 'cil', 'CiPaw.13G125000' => 'cil', 'CiPaw.14G061600' => 'cil', 'CiPaw.14G061700' => 'cil', 'CiPaw.14G061800' => 'cil', 'ClCG00G005450' => 'cla', 'ClCG00G005680' => 'cla', 'ClCG03G000940' => 'cla', 'ClCG03G000950' => 'cla', 'ClCG05G022080' => 'cla', 'ClCG06G014130' => 'cla', 'ClCG07G004840' => 'cla', 'ClCG10G013570' => 'cla', 'ClCG10G013580' => 'cla', 'ClCG10G013600' => 'cla', 'ClCG11G003950' => 'cla', 'COL.COLO4_16331' => 'col', 'COL.COLO4_16464' => 'col', 'COL.COLO4_19104' => 'col', 'COL.COLO4_19105' => 'col', 'COL.COLO4_25348' => 'col', 'COL.COLO4_25351' => 'col', 'COL.COLO4_32977' => 'col', 'COL.COLO4_32978' => 'col', 'COL.COLO4_32979' => 'col', 'COL.COLO4_32980' => 'col', 'Cpa.g.c46650' => 'cpa', 'Cpa.g.sc103.83' => 'cpa', 'Cpa.g.sc103.85' => 'cpa', 'Cpa.g.sc103.88' => 'cpa', 'Cpa.g.sc103.89' => 'cpa', 'Cpa.g.sc103.90' => 'cpa', 'Cpa.g.sc112.57' => 'cpa', 'Cpa.g.sc51.146' => 'cpa', 'Cpa.g.sc51.147' => 'cpa', 'CsaV3_1G004550' => 'csa', 'CsaV3_1G036000' => 'csa', 'CsaV3_1G036010' => 'csa', 'CsaV3_1G044820' => 'csa', 'CsaV3_1G044830' => 'csa', 'CsaV3_2G015230' => 'csa', 'CsaV3_2G015240' => 'csa', 'CsaV3_3G043060' => 'csa', 'CsaV3_3G043070' => 'csa', 'CsaV3_5G035070' => 'csa', 'CSS0001033' => 'camsi', 'CSS0002455' => 'camsi', 'CSS0008432' => 'camsi', 'CSS0013117' => 'camsi', 'CSS0013520' => 'camsi', 'CSS0015386' => 'camsi', 'CSS0016696' => 'camsi', 'CSS0017746' => 'camsi', 'CSS0020149' => 'camsi', 'CSS0020634' => 'camsi', 'CSS0023294' => 'camsi', 'CSS0023951' => 'camsi', 'CSS0024130' => 'camsi', 'CSS0025629' => 'camsi', 'CSS0029659' => 'camsi', 'CSS0031253' => 'camsi', 'CSS0033029' => 'camsi', 'CSS0033763' => 'camsi', 'CSS0033830' => 'camsi', 'CSS0039591' => 'camsi', 'CSS0040092' => 'camsi', 'CSS0040846' => 'camsi', 'CSS0047436' => 'camsi', 'CSS0048303' => 'camsi', 'DCAR_006193' => 'dca', 'DCAR_006633' => 'dca', 'DCAR_012263' => 'dca', 'DCAR_012264' => 'dca', 'DCAR_013474' => 'dca', 'DCAR_015651' => 'dca', 'DCAR_020663' => 'dca', 'DCAR_020664' => 'dca', 'DCAR_020665' => 'dca', 'DCAR_020666' => 'dca', 'DCAR_020669' => 'dca', 'DCAR_020670' => 'dca', 'DCAR_031342' => 'dca', 'Dinv00088' => 'din', 'Dinv00375' => 'din', 'Dinv04123' => 'din', 'Dinv11922' => 'din', 'Dinv11980' => 'din', 'Dinv14465' => 'din', 'Dinv14921' => 'din', 'Dinv25095' => 'din', 'Dinv25096' => 'din', 'Dinv25907' => 'din', 'Dinv28613' => 'din', 'Dinv28614' => 'din', 'Dinv32834' => 'din', 'Dinv32835' => 'din', 'Dinv32836' => 'din', 'Dinv39583' => 'din', 'Duzib041G0761' => 'dzi', 'Duzib106G0261' => 'dzi', 'Duzib114G0082' => 'dzi', 'Duzib128G1728' => 'dzi', 'Duzib150G0438' => 'dzi', 'Duzib150G1269' => 'dzi', 'Duzib168G0396' => 'dzi', 'Duzib168G0940' => 'dzi', 'Duzib168G2088' => 'dzi', 'Duzib177G0626' => 'dzi', 'Duzib177G0868' => 'dzi', 'ECA232G1995' => 'eca', 'ECA233G0662' => 'eca', 'ECA233G4723' => 'eca', 'ECA238G0102' => 'eca', 'ECA238G3290' => 'eca', 'ECA248G0703' => 'eca', 'ECA248G1349' => 'eca', 'EL10Ac3g06847' => 'bvu', 'EL10Ac4g08751' => 'bvu', 'EL10Ac4g09063' => 'bvu', 'EL10Ac5g10533' => 'bvu', 'EL10Ac5g11770' => 'bvu', 'EL10Ac6g15611' => 'bvu', 'EL10Ac7g16122' => 'bvu', 'EL10Ac7g16123' => 'bvu', 'EL10Ac7g16250' => 'bvu', 'EL10Ac8g19208' => 'bvu', 'EL10Ac8g20547' => 'bvu', 'EL10Ac8g20610' => 'bvu', 'Eucgr.A02116' => 'egr', 'Eucgr.A02118' => 'egr', 'Eucgr.B02276' => 'egr', 'Eucgr.B02287' => 'egr', 'Eucgr.G02657' => 'egr', 'Eucgr.J00603' => 'egr', 'Eucgr.J00604' => 'egr', 'Eucgr.J00605' => 'egr', 'Eucgr.J00606' => 'egr', 'Eucgr.J00607' => 'egr', 'Eucgr.J00608' => 'egr', 'Eucgr.J00609' => 'egr', 'FAN01G0421' => 'fan', 'FAN03G0706' => 'fan', 'FAN06G1844' => 'fan', 'FAN07G0019' => 'fan', 'FAN07G2188' => 'fan', 'FAN07G2620' => 'fan', 'FAN10G1383' => 'fan', 'FAN11G0865' => 'fan', 'FAN11G2915' => 'fan', 'FAN12G1410' => 'fan', 'FAN12G2227' => 'fan', 'FAN12G3860' => 'fan', 'FAN12G3965' => 'fan', 'FAN16G1744' => 'fan', 'FAN16G3480' => 'fan', 'FAN17G0940' => 'fan', 'FAN17G1221' => 'fan', 'FAN19G2926' => 'fan', 'FAN21G0190' => 'fan', 'FAN21G1095' => 'fan', 'FAN21G2644' => 'fan', 'FAN22G2195' => 'fan', 'FAN22G2363' => 'fan', 'FAN23G1900' => 'fan', 'FAN23G2972' => 'fan', 'FAN25G1617' => 'fan', 'FAN25G3393' => 'fan', 'FAN25G3501' => 'fan', 'FAN26G2592' => 'fan', 'FvH4_1g28352' => 'fve', 'FvH4_3g26960' => 'fve', 'FvH4_3g26961' => 'fve', 'FvH4_3g38160' => 'fve', 'FvH4_4g11940' => 'fve', 'FvH4_4g26180' => 'fve', 'FvH4_7g05180' => 'fve', 'FvH4_7g05220' => 'fve', 'Glyma.02G186800' => 'gma', 'Glyma.02G225000' => 'gma', 'Glyma.02G272100' => 'gma', 'Glyma.05G077000' => 'gma', 'Glyma.07G162700' => 'gma', 'Glyma.09G023400' => 'gma', 'Glyma.10G106600' => 'gma', 'Glyma.11G176400' => 'gma', 'Glyma.14G045000' => 'gma', 'Glyma.14G191900' => 'gma', 'Glyma.15G129500' => 'gma', 'Glyma.15G129551' => 'gma', 'Glyma.16G039300' => 'gma', 'Glyma.16G039400' => 'gma', 'Glyma.17G188200' => 'gma', 'Glyma.18G065367' => 'gma', 'Glyma.18G065433' => 'gma', 'Glyma.19G113500' => 'gma', 'Glyma.19G113600' => 'gma', 'Gohir.A01G186700' => 'ghi', 'Gohir.A05G076800' => 'ghi', 'Gohir.A05G090150' => 'ghi', 'Gohir.A05G285700' => 'ghi', 'Gohir.A06G129900' => 'ghi', 'Gohir.A07G114600' => 'ghi', 'Gohir.A09G103900' => 'ghi', 'Gohir.A11G233250' => 'ghi', 'Gohir.A11G233300' => 'ghi', 'Gohir.A13G099100' => 'ghi', 'Gohir.A13G225000' => 'ghi', 'Gohir.D01G183000' => 'ghi', 'Gohir.D05G079600' => 'ghi', 'Gohir.D05G091100' => 'ghi', 'Gohir.D05G286800' => 'ghi', 'Gohir.D07G118666' => 'ghi', 'Gohir.D09G033300' => 'ghi', 'Gohir.D09G100600' => 'ghi', 'Gohir.D11G244400' => 'ghi', 'Gohir.D11G244500' => 'ghi', 'Gohir.D13G102500' => 'ghi', 'Gohir.D13G230000' => 'ghi', 'Gorai.001G127600' => 'gra', 'Gorai.001G127700' => 'gra', 'Gorai.002G219500' => 'gra', 'Gorai.006G118100' => 'gra', 'Gorai.007G260000' => 'gra', 'Gorai.007G260100' => 'gra', 'Gorai.009G081100' => 'gra', 'Gorai.009G093600' => 'gra', 'Gorai.009G301800' => 'gra', 'Gorai.013G114800' => 'gra', 'Gorai.013G260700' => 'gra', 'GSVIVG01012185001' => 'vvi', 'GSVIVG01022483001' => 'vvi', 'GSVIVG01023452001' => 'vvi', 'GSVIVG01023455001' => 'vvi', 'GSVIVG01024793001' => 'vvi', 'GSVIVG01034613001' => 'vvi', 'GSVIVG01037542001' => 'vvi', 'GSVIVG01037543001' => 'vvi', 'GSVIVG01037546001' => 'vvi', 'GSVIVG01037547001' => 'vvi', 'HanXRQChr01g0011141' => 'han', 'HanXRQChr01g0011151' => 'han', 'HanXRQChr01g0026341' => 'han', 'HanXRQChr01g0026351' => 'han', 'HanXRQChr01g0028251' => 'han', 'HanXRQChr02g0033711' => 'han', 'HanXRQChr02g0033721' => 'han', 'HanXRQChr02g0052781' => 'han', 'HanXRQChr07g0191501' => 'han', 'HanXRQChr07g0196061' => 'han', 'HanXRQChr07g0196161' => 'han', 'HanXRQChr07g0196171' => 'han', 'HanXRQChr07g0197071' => 'han', 'HanXRQChr07g0197091' => 'han', 'HanXRQChr08g0219341' => 'han', 'HanXRQChr09g0261911' => 'han', 'HanXRQChr11g0326441' => 'han', 'HanXRQChr11g0347491' => 'han', 'HanXRQChr13g0412531' => 'han', 'HanXRQChr13g0412541' => 'han', 'HanXRQChr13g0422561' => 'han', 'HanXRQChr14g0453131' => 'han', 'HanXRQChr14g0453141' => 'han', 'Haze_03418' => 'cav', 'Haze_20479' => 'cav', 'Haze_23623' => 'cav', 'Haze_23624' => 'cav', 'Haze_24253' => 'cav', 'Haze_24254' => 'cav', 'Hma1.2p1_0127F.1_g059485' => 'hma', 'Hma1.2p1_0127F.1_g059490' => 'hma', 'Hma1.2p1_0227F.1_g096290' => 'hma', 'Hma1.2p1_0304F.1_g119140' => 'hma', 'Hma1.2p1_0304F.1_g119150' => 'hma', 'Hma1.2p1_0610F.1_g188570' => 'hma', 'HPP92_006630' => 'vpl', 'HPP92_006649' => 'vpl', 'HPP92_011036' => 'vpl', 'HPP92_011037' => 'vpl', 'HPP92_016622' => 'vpl', 'HPP92_016623' => 'vpl', 'HPP92_016625' => 'vpl', 'HPP92_016626' => 'vpl', 'HPP92_016627' => 'vpl', 'HPP92_016628' => 'vpl', 'HPP92_016629' => 'vpl', 'HPP92_016630' => 'vpl', 'HPP92_016631' => 'vpl', 'HPP92_026335' => 'vpl', 'HPP92_026336' => 'vpl', 'HPP92_026337' => 'vpl', 'Hund06822' => 'sun', 'Hund15046' => 'sun', 'Hund16405' => 'sun', 'Hund16406' => 'sun', 'Hund18859' => 'sun', 'Hund20970' => 'sun', 'Lalb_Chr02g0157221' => 'lal', 'Lalb_Chr02g0157241' => 'lal', 'Lalb_Chr15g0082711' => 'lal', 'Lalb_Chr18g0057941' => 'lal', 'Lalb_Chr20g0114991' => 'lal', 'Lalb_Chr20g0120031' => 'lal', 'Lalb_Chr21g0317221' => 'lal', 'Lalb_Chr21g0317231' => 'lal', 'Lalb_Chr21g0317241' => 'lal', 'Lj1A1066T54' => 'lonja', 'Lj1A142G66' => 'lonja', 'Lj1g0010697' => 'lja', 'Lj2A1077T60' => 'lonja', 'Lj2A858G44' => 'lonja', 'Lj2C418T13' => 'lonja', 'Lj2C881T1' => 'lonja', 'Lj2g0002572' => 'lja', 'Lj6g0001731' => 'lja', 'Lj6g0005236' => 'lja', 'Lj6g0013556' => 'lja', 'Lj9A663T48' => 'lonja', 'LjContig00155g0016883' => 'lja', 'Lsat_1_v5_gn_2_103761' => 'lsa', 'Lsat_1_v5_gn_2_103821' => 'lsa', 'Lsat_1_v5_gn_2_103841' => 'lsa', 'Lsat_1_v5_gn_2_103921' => 'lsa', 'Lsat_1_v5_gn_4_133320' => 'lsa', 'Lsat_1_v5_gn_5_172380' => 'lsa', 'Lsat_1_v5_gn_6_31901' => 'lsa', 'Manes.01G164700' => 'mes', 'Manes.04G051400' => 'mes', 'Manes.08G146000' => 'mes', 'Manes.09G139400' => 'mes', 'Manes.10G070500' => 'mes', 'Manes.11G105100' => 'mes', 'Manes.S045616' => 'mes', 'Mapoly0014s0034' => 'mpo', 'Mapoly0014s0035' => 'mpo', 'Mapoly0214s0013' => 'mpo', 'Mapoly0214s0014' => 'mpo', 'MBI05_g27785_MAGBIO' => 'mbi', 'MBI05_g32550_MAGBIO' => 'mbi', 'MBI11_g25047_MAGBIO' => 'mbi', 'MBI14_g40912_MAGBIO' => 'mbi', 'MBI19_g02925_MAGBIO' => 'mbi', 'MD02G1089300' => 'mdo', 'MD02G1242000' => 'mdo', 'MD02G1242100' => 'mdo', 'MD02G1242200' => 'mdo', 'MD02G1242300' => 'mdo', 'MD02G1259600' => 'mdo', 'MD02G1259900' => 'mdo', 'MD03G1076100' => 'mdo', 'MD03G1161800' => 'mdo', 'MD07G1060900' => 'mdo', 'MD11G1080700' => 'mdo', 'MD11G1177800' => 'mdo', 'MD11G1177900' => 'mdo', 'MD11G1178000' => 'mdo', 'MD14G1004200' => 'mdo', 'MD14G1004400' => 'mdo', 'Medtr2g030000' => 'mtr', 'Medtr3g079750' => 'mtr', 'Medtr3g079770' => 'mtr', 'Medtr3g462820' => 'mtr', 'Medtr5g069740' => 'mtr', 'Medtr5g069800' => 'mtr', 'Medtr5g069850' => 'mtr', 'Medtr6g028090' => 'mtr', 'Medtr6g028100' => 'mtr', 'Medtr6g028110' => 'mtr', 'Medtr6g028120' => 'mtr', 'Medtr7g086010' => 'mtr', 'Medtr7g086030' => 'mtr', 'MELO3C010084.2' => 'cme', 'MELO3C012319.2' => 'cme', 'MELO3C017382.2' => 'cme', 'MELO3C020567.2' => 'cme', 'MELO3C020568.2' => 'cme', 'MELO3C023157.2' => 'cme', 'MELO3C023349.2' => 'cme', 'MELO3C026609.2' => 'cme', 'MELO3C026610.2' => 'cme', 'MELO3C028503.2' => 'cme', 'Migut.B01121' => 'egut', 'Migut.D00862' => 'egut', 'Migut.D02463' => 'egut', 'Migut.D02464' => 'egut', 'Migut.J00757' => 'egut', 'Migut.J00758' => 'egut', 'Migut.K01207' => 'egut', 'Migut.L01862' => 'egut', 'Migut.L01863' => 'egut', 'Migut.N00824' => 'egut', 'MSTRG.18555' => 'ama', 'MSTRG.18805' => 'ama', 'MSTRG.20467' => 'ama', 'MSTRG.20997' => 'ama', 'MSTRG.20998' => 'ama', 'MSTRG.26565' => 'ama', 'MSTRG.5922' => 'ama', 'Nitab4.5_0000010g0130' => 'nta', 'Nitab4.5_0000102g0210' => 'nta', 'Nitab4.5_0000157g0130' => 'nta', 'Nitab4.5_0000271g0020' => 'nta', 'Nitab4.5_0000271g0030' => 'nta', 'Nitab4.5_0000733g0100' => 'nta', 'Nitab4.5_0001504g0140' => 'nta', 'Nitab4.5_0001505g0020' => 'nta', 'Nitab4.5_0002247g0180' => 'nta', 'Nitab4.5_0003359g0010' => 'nta', 'Nitab4.5_0003359g0020' => 'nta', 'Nitab4.5_0003644g0010' => 'nta', 'Nitab4.5_0004014g0030' => 'nta', 'Nitab4.5_0005156g0050' => 'nta', 'Nitab4.5_0005156g0060' => 'nta', 'Nitab4.5_0005439g0040' => 'nta', 'Nitab4.5_0005892g0020' => 'nta', 'Nitab4.5_0006700g0040' => 'nta', 'Nitab4.5_0007702g0010' => 'nta', 'Nn2g11378' => 'nnu', 'Nn2g14479' => 'nnu', 'Nn3g18485' => 'nnu', 'Nn3g18488' => 'nnu', 'Nn3g18489' => 'nnu', 'Oeu004564.1' => 'oeu', 'Oeu006509.1' => 'oeu', 'Oeu012469.1' => 'oeu', 'Oeu019906.1' => 'oeu', 'Oeu020205.1' => 'oeu', 'Oeu022222.1' => 'oeu', 'Oeu031441.2' => 'oeu', 'Oeu031918.1' => 'oeu', 'Oeu035003.1' => 'oeu', 'Oeu038471.1' => 'oeu', 'Oeu045299.1' => 'oeu', 'Oeu045516.1' => 'oeu', 'Oeu048811.1' => 'oeu', 'Oeu049581.1' => 'oeu', 'Oeu051494.1' => 'oeu', 'Oeu051495.1' => 'oeu', 'Oeu058173.1' => 'oeu', 'Oeu058176.3' => 'oeu', 'Oeu058177.1' => 'oeu', 'Oeu058178.1' => 'oeu', 'Oeu060088.1' => 'oeu', 'Oeu063099.1' => 'oeu', 'Oeu063800.2' => 'oeu', 'Os01g0771900' => 'osa', 'Os02g0131400' => 'osa', 'Os03g0749100' => 'osa', 'Os03g0749300' => 'osa', 'Os03g0749500' => 'osa', 'Os05g0449600' => 'osa', 'Peaxi162Scf00216g01314' => 'pax', 'Peaxi162Scf00217g00313' => 'pax', 'Peaxi162Scf00217g00314' => 'pax', 'Peaxi162Scf00345g00066' => 'pax', 'Peaxi162Scf00355g00021' => 'pax', 'Peaxi162Scf00355g00023' => 'pax', 'Peaxi162Scf00486g00089' => 'pax', 'Peaxi162Scf00493g00221' => 'pax', 'Peaxi162Scf00647g00131' => 'pax', 'Peaxi162Scf01058g00161' => 'pax', 'PGR042G1294' => 'pgr', 'PGR042G1452' => 'pgr', 'PGR044G0578' => 'pgr', 'PGR044G0697' => 'pgr', 'PGR044G0890' => 'pgr', 'PGR044G0917' => 'pgr', 'PGR044G1043' => 'pgr', 'PGR102G1059' => 'pgr', 'PGR102G1673' => 'pgr', 'PGR119G0999' => 'pgr', 'PGR142G0023' => 'pgr', 'PGR142G0028' => 'pgr', 'PGR142G1145' => 'pgr', 'PGR142G3337' => 'pgr', 'PGR142G3805' => 'pgr', 'PGSC0003DMG400003012' => 'stu', 'PGSC0003DMG400003013' => 'stu', 'PGSC0003DMG400004162' => 'stu', 'PGSC0003DMG400005943' => 'stu', 'PGSC0003DMG400013135' => 'stu', 'PGSC0003DMG400027240' => 'stu', 'PGSC0003DMG400027520' => 'stu', 'PGSC0003DMG400030439' => 'stu', 'PGSC0003DMG400030452' => 'stu', 'PGSC0003DMG400044859' => 'stu', 'PGSC0003DMG401005942' => 'stu', 'PGSC0003DMG402005942' => 'stu', 'Phvul.001G112600' => 'pvu', 'Phvul.001G112700' => 'pvu', 'Phvul.004G050500' => 'pvu', 'Phvul.006G065600' => 'pvu', 'Phvul.006G128800' => 'pvu', 'Phvul.007G250300' => 'pvu', 'Phvul.008G210100' => 'pvu', 'Potri.005G059200' => 'ptr', 'Potri.008G013500' => 'ptr', 'Potri.008G013700' => 'ptr', 'Potri.009G042800' => 'ptr', 'Potri.009G153900' => 'ptr', 'Potri.009G153966' => 'ptr', 'Potri.009G154032' => 'ptr', 'Potri.009G154701' => 'ptr', 'Potri.009G154802' => 'ptr', 'Potri.013G055600' => 'ptr', 'Potri.013G055700' => 'ptr', 'Potri.019G037400' => 'ptr', 'Pp3c23_18990' => 'ppa', 'Pp3c24_19980' => 'ppa', 'Pp3c26_8580' => 'ppa', 'Pp3c4_23400' => 'ppa', 'Pp3c6_240' => 'ppa', 'Prupe.2G065700' => 'ppe', 'Prupe.2G092300' => 'ppe', 'Prupe.2G092600' => 'ppe', 'Prupe.2G092700' => 'ppe', 'Prupe.2G092900' => 'ppe', 'Prupe.6G061000' => 'ppe', 'Prupe.6G150000' => 'ppe', 'Prupe.6G150200' => 'ppe', 'Prupe.6G150400' => 'ppe', 'Prupe.6G150500' => 'ppe', 'Prupe.6G150800' => 'ppe', 'Prupe.7G006800' => 'ppe', 'Prupe.7G007100' => 'ppe', 'Prupe.7G007200' => 'ppe', 'Prupe.7G007600' => 'ppe', 'Prupe.7G007700' => 'ppe', 'Psat1g095240' => 'psa', 'Psat1g168000' => 'psa', 'Psat3g088120' => 'psa', 'Psat3g088160' => 'psa', 'Psat3g094920' => 'psa', 'Psat3g095200' => 'psa', 'Psat5g107680' => 'psa', 'Psat5g160960' => 'psa', 'Psat7g061320' => 'psa', 'Psat7g234920' => 'psa', 'PSO063G3724' => 'pso', 'PSO063G6638' => 'pso', 'PSO210G7062' => 'pso', 'PSO229G0024' => 'pso', 'PSO339G0719' => 'pso', 'PSO339G1036' => 'pso', 'PSO339G1266' => 'pso', 'PSO339G1913' => 'pso', 'PSO339G3402' => 'pso', 'PSO339G3616' => 'pso', 'PSO339G6179' => 'pso', 'PSO339G6324' => 'pso', 'PSO384G0324' => 'pso', 'PSO384G0591' => 'pso', 'PSO384G1522' => 'pso', 'PSO384G3474' => 'pso', 'PSO384G3708' => 'pso', 'PSO384G3960' => 'pso', 'PSO423G0045' => 'pso', 'PSO675G7268' => 'pso', 'PSO675G8143' => 'pso', 'PSO832G0884' => 'pso', 'QL01p018719' => 'qlo', 'QL01p018731' => 'qlo', 'QL01p026871' => 'qlo', 'QL01p026882' => 'qlo', 'QL01p026892' => 'qlo', 'QL04p049723' => 'qlo', 'QL04p049742' => 'qlo', 'QL04p049748' => 'qlo', 'QL04p049757' => 'qlo', 'QL04p049778' => 'qlo', 'QL07p018843' => 'qlo', 'QL07p036035' => 'qlo', 'RcHm_v2.0_Chr1g0331601' => 'rch', 'RcHm_v2.0_Chr3g0496681' => 'rch', 'RcHm_v2.0_Chr3g0496721' => 'rch', 'RcHm_v2.0_Chr4g0433771' => 'rch', 'RcHm_v2.0_Chr5g0049431' => 'rch', 'RcHm_v2.0_Chr5g0049441' => 'rch', 'RcHm_v2.0_Chr5g0049451' => 'rch', 'RcHm_v2.0_Chr5g0049481' => 'rch', 'RcHm_v2.0_Chr5g0068591' => 'rch', 'RcHm_v2.0_Chr5g0079371' => 'rch', 'RcHm_v2.0_Chr6g0246121' => 'rch', 'RcHm_v2.0_Chr6g0274311' => 'rch', 'Rhsim01G0197800' => 'rsi', 'Rhsim01G0235100' => 'rsi', 'Rhsim01G0235200' => 'rsi', 'Rhsim02G0196900' => 'rsi', 'Rhsim03G0055000' => 'rsi', 'Rhsim03G0055100' => 'rsi', 'Rhsim03G0055200' => 'rsi', 'Rhsim03G0055300' => 'rsi', 'Rhsim03G0055400' => 'rsi', 'Rhsim03G0056200' => 'rsi', 'Rhsim03G0056300' => 'rsi', 'Rhsim03G0056400' => 'rsi', 'Rhsim04G0082300' => 'rsi', 'Rhsim09G0015000' => 'rsi', 'Rhsim10G0054200' => 'rsi', 'Rhsim13G0072300' => 'rsi', 'Rhsim13G0072400' => 'rsi', 'Rhsim13G0072500' => 'rsi', 'Rhsim13G0197900' => 'rsi', 'Rhsim13G0198000' => 'rsi', 'Rhsim13G0199500' => 'rsi', 'RhsimUnG0026000' => 'rsi', 'RhsimUnG0114900' => 'rsi', 'Sabra08G0008200' => 'sbr', 'Sabra08G0008300' => 'sbr', 'Sabra09G0030300' => 'sbr', 'Sabra09G0121100' => 'sbr', 'Sabra09G0121200' => 'sbr', 'Sabra13G0049900' => 'sbr', 'Sabra19G0048700' => 'sbr', 'SalBow1G7201' => 'sbo', 'SalBow1G7736' => 'sbo', 'SalBow2G1704' => 'sbo', 'SalBow3G0247' => 'sbo', 'SalBow6G2855' => 'sbo', 'SalBow6G3426' => 'sbo', 'SalBow6G5174' => 'sbo', 'SalBow6G5668' => 'sbo', 'SalBow6G7026' => 'sbo', 'SalBow8G3027' => 'sbo', 'Sc03g0002430' => 'sci', 'Sc07g0007860' => 'sci', 'Sc07g0007870' => 'sci', 'Sc07g0007880' => 'sci', 'Sc09g0004850' => 'sci', 'Sc11g0004040' => 'sci', 'Sc12g0000480' => 'sci', 'Sc12g0000840' => 'sci', 'Sc12g0000850' => 'sci', 'Sc16g0004270' => 'sci', 'Sed0000207' => 'sed', 'Sed0003193' => 'sed', 'Sed0003825' => 'sed', 'Sed0011573' => 'sed', 'Sed0013485' => 'sed', 'Sed0013829' => 'sed', 'Sed0015922' => 'sed', 'Sed0017235' => 'sed', 'Sed0027069' => 'sed', 'SEGI_05039' => 'sgi', 'SEGI_14488' => 'sgi', 'SEGI_15681' => 'sgi', 'SEGI_19375' => 'sgi', 'SEGI_19971' => 'sgi', 'SEGI_25982' => 'sgi', 'SEGI_26146' => 'sgi', 'SEGI_27883' => 'sgi', 'SEGI_41535' => 'sgi', 'SGA_v2.0_scaffold112G31654' => 'sas', 'SGA_v2.0_scaffold112G31655' => 'sas', 'SGA_v2.0_scaffold112G31658' => 'sas', 'SGA_v2.0_scaffold114G31947' => 'sas', 'SGA_v2.0_scaffold120G32942' => 'sas', 'SGA_v2.0_scaffold16G07551' => 'sas', 'SGA_v2.0_scaffold20G09306' => 'sas', 'SGA_v2.0_scaffold31G12805' => 'sas', 'SGA_v2.0_scaffold36G14390' => 'sas', 'SGA_v2.0_scaffold392G50665' => 'sas', 'SGA_v2.0_scaffold73G24503' => 'sas', 'SGA_v2.0_scaffold73G24505' => 'sas', 'SGA_v2.0_scaffold73G24507' => 'sas', 'SGA_v2.0_scaffold8G04329' => 'sas', 'SHI05884' => 'shi', 'SMO268G0026' => 'smo', 'SMO271G0086' => 'smo', 'SMO308G0037' => 'smo', 'SMO367G0953' => 'smo', 'Solyc01g009240.4' => 'sly', 'Solyc01g097000.3' => 'sly', 'Solyc04g015560.4' => 'sly', 'Solyc06g005970.2' => 'sly', 'Solyc06g073740.3' => 'sly', 'Solyc06g073750.4' => 'sly', 'Solyc06g073760.3' => 'sly', 'Solyc06g076780.3' => 'sly', 'Solyc11g071640.3' => 'sly', 'Solyc11g071650.3' => 'sly', 'Sopen01g004720' => 'spe', 'Sopen01g040700' => 'spe', 'Sopen04g007620' => 'spe', 'Sopen06g001940' => 'spe', 'Sopen06g030140' => 'spe', 'Sopen06g030150' => 'spe', 'Sopen06g030160' => 'spe', 'Sopen06g033160' => 'spe', 'Sopen11g029310' => 'spe', 'Sopen11g029320' => 'spe', 'Sp5g00810' => 'spa', 'Sp5g14690' => 'spa', 'Sp5g14700' => 'spa', 'Sp5g14710' => 'spa', 'Sp5g14720' => 'spa', 'Sp6g23570' => 'spa', 'Sp6g23580' => 'spa', 'Sp6g37940' => 'spa', 'TAR258G0002' => 'tar', 'TAR369G0183' => 'tar', 'TAR369G0510' => 'tar', 'TAR371G0902' => 'tar', 'TAR371G1212' => 'tar', 'TAR623G1130' => 'tar', 'TAR633G0057' => 'tar', 'TAR636G0503' => 'tar', 'TAR636G3672' => 'tar', 'THA.LOC104803070' => 'tha', 'THA.LOC104810727' => 'tha', 'THA.LOC104810969' => 'tha', 'THA.LOC104810970' => 'tha', 'THA.LOC104814905' => 'tha', 'THA.LOC104815064' => 'tha', 'THA.LOC104817621' => 'tha', 'THA.LOC104821482' => 'tha', 'THA.LOC104823781' => 'tha', 'THA.LOC104826957' => 'tha', 'Thecc.05G247200' => 'tca', 'Thecc.05G247300' => 'tca', 'Thecc.09G266700' => 'tca', 'Thecc.09G266800' => 'tca', 'Thecc.09G305900' => 'tca', 'Thecc.09G306000' => 'tca', 'Thecc.10G122600' => 'tca', 'Thhalv10001117m.g' => 'esa', 'Thhalv10002832m.g' => 'esa', 'Thhalv10005832m.g' => 'esa', 'Thhalv10010212m.g' => 'esa', 'Thhalv10010213m.g' => 'esa', 'Thhalv10010219m.g' => 'esa', 'Thhalv10010536m.g' => 'esa', 'Thhalv10012900m.g' => 'esa', 'Thhalv10012963m.g' => 'esa', 'Thhalv10015493m.g' => 'esa', 'Thhalv10029331m.g' => 'esa', 'TPR.G13292' => 'tpr', 'TPR.G13873' => 'tpr', 'TPR.G15578' => 'tpr', 'TPR.G24038' => 'tpr', 'TPR.G24044' => 'tpr', 'TPR.G26334' => 'tpr', 'TPR.G30474' => 'tpr', 'TPR.G37706' => 'tpr', 'TPR.G7070' => 'tpr', 'TPR.G9136' => 'tpr', 'TPR.G9140' => 'tpr', 'TWI09G1559' => 'twi', 'TWI31G1203' => 'twi', 'TWI38G1943' => 'twi', 'TWI60G1598' => 'twi', 'TWI63G1292' => 'twi', 'TWI75G1003' => 'twi', 'TWI75G1297' => 'twi', 'TWI79G0075' => 'twi', 'TWI79G0304' => 'twi', 'TWI79G0491' => 'twi', 'TWI79G1477' => 'twi', 'unitig_26.g10202' => 'ugi', 'unitig_26.g9157' => 'ugi', 'unitig_26.g9293' => 'ugi', 'unitig_61.g26381' => 'ugi', 'unitig_699.g19297' => 'ugi', 'unitig_736.g22323' => 'ugi', 'unitig_736.g22324' => 'ugi', 'unitig_746.g26786' => 'ugi', 'unitig_749.g14342' => 'ugi', 'unitig_749.g14343' => 'ugi', 'unitig_899.g15392' => 'ugi', 'vmacro00663' => 'vma', 'vmacro00664' => 'vma', 'vmacro00667' => 'vma', 'vmacro01317' => 'vma', 'vmacro02991' => 'vma', 'vmacro03945' => 'vma', 'vmacro04050' => 'vma', 'vmacro04060' => 'vma', 'vmacro07543' => 'vma', 'vmacro07544' => 'vma', 'vmacro07545' => 'vma', 'vmacro09186' => 'vma', 'vmacro09191' => 'vma', 'vmacro14298' => 'vma', 'vmacro14299' => 'vma', 'vmacro14581' => 'vma', 'vmacro14582' => 'vma', 'VMungo0464G0542' => 'vmu', 'VMungo0464G0581' => 'vmu', 'VMungo0464G1547' => 'vmu', 'VMungo0540G0635' => 'vmu', 'VMungo0540G1485' => 'vmu', 'VMungo0647G0744' => 'vmu', 'VMungo0647G2431' => 'vmu', 'VMungo0720G2971' => 'vmu', 'VMungo1383G1016' => 'vmu', 'VMungo1383G2533' => 'vmu', 'Zm00001eb057230' => 'zma', 'Zm00001eb057250' => 'zma', 'Zm00001eb151890' => 'zma', 'Zm00001eb208980' => 'zma', 'Zm00001eb214870' => 'zma', 'Zm00001eb214880' => 'zma', 'Zm00001eb288750' => 'zma', 'Zm00001eb288760' => 'zma' ) $gf_id = 'HOM05D000495' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000495' ) $data_identifier = 'HOM05D000495' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 16, 'amhyb' => (int) 7, 'aly' => (int) 8, 'aox' => (int) 2, 'arhy' => (int) 20, 'ath' => (int) 8, 'atr' => (int) 10, 'acertr' => (int) 9, 'cqu' => (int) 12, 'bca' => (int) 30, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 16, 'cansat' => (int) 4, 'chi' => (int) 6, 'cru' => (int) 8, 'car' => (int) 9, 'ccan' => (int) 16, 'cde' => (int) 4, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 11, 'cla' => (int) 11, 'col' => (int) 10, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 24, 'dca' => (int) 13, 'din' => (int) 16, 'dzi' => (int) 11, 'eca' => (int) 7, 'bvu' => (int) 12, 'egr' => (int) 12, 'fan' => (int) 29, 'fve' => (int) 8, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 10, 'han' => (int) 23, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 16, 'sun' => (int) 6, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 6, 'lsa' => (int) 7, 'mes' => (int) 7, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 13, 'cme' => (int) 10, 'egut' => (int) 10, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 5, 'oeu' => (int) 23, 'osa' => (int) 6, 'pax' => (int) 10, 'pgr' => (int) 15, 'stu' => (int) 12, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 5, 'ppe' => (int) 16, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 12, 'rch' => (int) 12, 'rsi' => (int) 23, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 14, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 11, 'twi' => (int) 11, 'ugi' => (int) 11, 'vma' => (int) 17, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb288760' $species_info = array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) $local_species = 'zma' $disabled = '' $selected = '' $num_hits = (int) 1